geno.crosstab

Create a cross tabulation of the genotypes at a pair of markers.

utilities

Analysis of experimental crosses to identify genes
(called quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Broman et al. (2003) <doi:10.1093/bioinformatics/btg112>.

Karl Broman

Tools for Analyzing QTL Experiments

Hao Wu

Gary Churchill

Saunak Sen

Danny Arends

Robert Corty

Timothee Flutre

Ritsert Jansen

Pjotr Prins

Lars Ronnegard

Rohan Shah

Laura Shannon

Quoc Tran

Aaron Wolen

Brian Yandell

R Core Team 

geno.crosstab function

<dl> <dt>cross</dt>
<dd>An object of class <code>cross</code>. See
 <code>read.cross</code> for details.</dd> <dt>mname1</dt>
<dd>The name of the first marker (as a character
 string). (Alternatively, a vector with the two character strings, in
 which case <code>mname2</code> should not be given.)</dd> <dt>mname2</dt>
<dd>The name of the second marker (as a character string).</dd> <dt>eliminate.zeros</dt>
<dd>If TRUE, don't show the rows and columns that
 have no data.</dd></dl>

Arguments

Karl W Broman, <a href="/link/broman%40wisc.edu?package=qtl&version=1.70" data-mini-rdoc="qtl::broman@wisc.edu">broman@wisc.edu</a>

Author

Create table of two-locus genotypes — geno.crosstab

<dl>

 <dt>cross</dt>
<dd>An object of class <code>cross</code>. See
 <code>read.cross</code> for details.</dd>

 <dt>mname1</dt>
<dd>The name of the first marker (as a character
 string). (Alternatively, a vector with the two character strings, in
 which case <code>mname2</code> should not be given.)</dd>

 <dt>mname2</dt>
<dd>The name of the second marker (as a character string).</dd>

 <dt>eliminate.zeros</dt>
<dd>If TRUE, don't show the rows and columns that
 have no data.</dd>

</dl>

Karl W Broman, <a href='mailto:broman@wisc.edu'>broman@wisc.edu</a>

Create table of two-locus genotypes

geno.crosstab: Create table of two-locus genotypes

Description

Usage

Value

Arguments

Author

See Also

Examples