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Calculates a bootstrap confidence interval for QTL location, using the bootstrap results from scanoneboot.
scanoneboot
# S3 method for scanoneboot summary(object, prob=0.95, expandtomarkers=FALSE, ...)
An object of class scanone, indicating the position with the maximum LOD, and indicating endpoints for the estimated bootstrap confidence interval.
scanone
Output from scanoneboot.
Desired coverage.
If TRUE, the interval is expanded to the nearest flanking markers.
Ignored at this point.
Karl W Broman, broman@wisc.edu
scanoneboot, plot.scanoneboot, lodint, bayesint
plot.scanoneboot
lodint
bayesint
if (FALSE) data(fake.f2) fake.f2 <- calc.genoprob(fake.f2, step=1, err=0.001) bootoutput <- scanoneboot(fake.f2, chr=13, method="hk") summary(bootoutput)
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