trait_categories-class

The trait_categories object consists of two tables (slots) that combined form
a relational database of a subset of PGS Catalog trait categories. Each score
is an observation (row) in the <code>trait_categories</code> table (first table).

Programmatic access to the 'PGS' Catalog.
This package provides easy access to 'PGS' Catalog data by
accessing the REST API <https://www.pgscatalog.org/rest/>.

Ramiro Magno

quincunx

REST API Client for the 'PGS' Catalog

Isabel Duarte

Ana-Teresa Maia

CINTESIS 

Pattern Institute 

trait_categories-class function

<dl>
<dt><code>trait_categories</code></dt>
<dd>A table of trait categories. Columns:<dl>
<dt>trait_category</dt>
<dd>Trait category name.</dd></dl></dd></dl>

<dt><code>traits</code></dt>
<dd>A table of associated traits. Columns:<dl>
<dt>trait_category</dt>
<dd>Trait category name.</dd></dl></dd><dt>efo_id</dt>
<dd>An <a href="https://www.ebi.ac.uk/efo/">EFO</a> identifier.</dd><dt>trait</dt>
<dd>Trait name.</dd><dt>description</dt>
<dd>Detailed description of the trait from EFO.</dd><dt>url</dt>
<dd>External link to the EFO entry.</dd>

Slots

An S4 class to represent a set of PGS Catalog Trait Categories — trait_categories-class

<dl>
<dt><code>trait_categories</code></dt>
<dd>A table of trait categories. Columns:<dl>
<dt>trait_category</dt>
<dd>Trait category name.</dd>


</dl></dd>


<dt><code>traits</code></dt>
<dd>A table of associated traits. Columns:<dl>
<dt>trait_category</dt>
<dd>Trait category name.</dd>

<dt>efo_id</dt>
<dd>An <a href='https://www.ebi.ac.uk/efo/'>EFO</a> identifier.</dd>

<dt>trait</dt>
<dd>Trait name.</dd>

<dt>description</dt>
<dd>Detailed description of the trait from EFO.</dd>

<dt>url</dt>
<dd>External link to the EFO entry.</dd>


</dl></dd>


</dl>

trait_categories-class: An S4 class to represent a set of PGS Catalog Trait Categories

Description

Arguments

Slots