quincunx (version 0.1.9)

get_releases: Get PGS Catalog Releases

Description

This function retrieves PGS Catalog release information. Note that the columns pgs_id, ppm_id and pgp_id contain in each element a vector. These columns can be unnested using unnest_longer (see Examples).

Usage

get_releases(
  date = "latest",
  verbose = FALSE,
  warnings = TRUE,
  progress_bar = TRUE
)

Value

A data frame where each row is a release. Columns are:

date

Release date.

n_pgs

Number of released Polygenic Score (PGS) identifiers (pgs_id).

n_ppm

Number of released Performance Metric (PPM) identifiers (ppm_id).

n_pgp

Number of released PGS Catalog Publication (PGP) identifiers (pgp_id).

pgs_id

Released Polygenic Score (PGS) identifiers.

ppm_id

Released Performance Metric (PPM) identifiers.

pgp_id

Released PGS Catalog Publication (PGP) identifiers.

notes

News about the release.

Arguments

date

One or more dates formatted as "YYYY-MM-DD" for respective releases, "latest" for the latest release, or "all" for all releases.

verbose

Whether to print information about the underlying requests to the REST API server.

warnings

Whether to print warnings about the underlying requests to the REST API server.

progress_bar

Whether to show a progress bar indicating download progress from the REST API server.

Examples

if (FALSE) {
# Get the latest release
get_releases()
get_releases(date = 'latest')

# Get all releases
get_releases(date = 'all')

# Get a specific release by date
get_releases(date = '2020-08-19')
}