r4ss (version 1.44.0)

SSplotMCMC_ExtraSelex: Plot uncertainty around chosen selectivity ogive from MCMC.

Description

Plot uncertainty in selectivity from an MCMC output for whichever fleet/year was chosen in the optional extra "more stddev reporting"

Usage

SSplotMCMC_ExtraSelex(
  post,
  add = FALSE,
  nsexes = 1,
  shift = 0,
  fleetname = "default",
  col = "blue"
)

Arguments

post

A data frame containing either derived_posteriors.sso or a good subset of it. This can be an element of the list created by the the SSgetMCMC() function.

add

TRUE/FALSE option to add results to an existing plot.

nsexes

Number of sexes in the model (should match model values but is only used in the title).

shift

Optional adjustment to the x values to avoid overlap of intervals when overplotting on an existing plot.

fleetname

Optional input to make the title better. Default will be something like "Fleet 1", using the numbering from the model.

col

Color for points and lines.