exdat

<p>Example data, comprised of simulated genotypes for 10 SNPs 
on the same chromosome, for five
unrelated individuals, along with a genetic map for the SNPs.
The fifth subject has missing genotypes at SNPs 3 and 4.</p>

datasets

R-interface to gene drop programs from Alun Thomas' Java Programs for Statistical Genetics and Computational Statistics (JPSGCS).

Brad McNeney

rJPSGCS

R-Interface to Gene Drop Simulation from JPSGCS

Sigal Blay

Jinko Graham

Annick Nembot-Simo

Alun Thomas

Hin-Tak Leung

exdat function

<p>A list with the following elements:</p><table><tr><td>
<code>$markers</code> </td>
<td> a numeric matrix of SNP genotypes coded as 0, 1 or 2 copies of an index allele </td>
</tr><tr><td>
<code>$map</code> </td>
<td> a numeric vector containing the genetic map positions for the SNPs in centiMorgans </td>
</tr></table>

Format

example data for rJPSGCS — exdat

example data for rJPSGCS

exdat: example data for rJPSGCS

Description

Usage

Arguments

Format

Examples

`$markers`	a numeric matrix of SNP genotypes coded as 0, 1 or 2 copies of an index allele
`$map`	a numeric vector containing the genetic map positions for the SNPs in centiMorgans