rareGEgeno

datasets

Tests gene-environment interaction for rare genetic variants using Sequence Kernel Association Test (SKAT) type gene-based tests. Includes two tests for the interaction term only, and one joint test for genetic main effects and gene-environment interaction.

Han Chen

rareGE

Testing Gene-Environment Interaction for Rare Genetic Variants

rareGEgeno function

A data matrix for 500 individuals and a gene with 20 SNPs. Each row represents an individual and each column represents a SNP.

rareGEgeno: Example genotype data

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