isOpen

isOpen-methods

An instance of class bamReader or bamWriter.

This argument is included solely for compatibility with the
 function template for connections in package base. 
 It's not evaluated internally.

Checks whether the given bamReader or bamWriter represents an opened
 connection to a BAM-file.

methods

Provides an R interface to functions of the 'SAMtools' C-Library by Heng Li <http://www.htslib.org/>.

Wolfgang Kaisers

rbamtools

Read and Write BAM (Binary Alignment) Files

Heng Li

Jue Ruan

isOpen-methods function

<dl class="dl-horizontal">
 <dt><code>signature(object = "bamReader")</code></dt><dd>Returns TRUE when file connection is open.</dd>
 %
 <dt><code>signature(object = "bamWriter")</code></dt><dd>Returns TRUE when file connection is open.</dd>
</dl>

Methods

isOpen(bamReader), isOpen(bamWriter): Checking for opened file 
    connection to BAM file. — isOpen-methods

<dl class='dl-horizontal'>
 <dt><code>signature(object = "bamReader")</code></dt><dd>Returns TRUE when file connection is open.</dd>
 %
 <dt><code>signature(object = "bamWriter")</code></dt><dd>Returns TRUE when file connection is open.</dd>
</dl>

isOpen-methods: isOpen(bamReader), isOpen(bamWriter): Checking for opened file connection to BAM file.

Description

Usage

Arguments

Methods

Details