predict

predict.libbi

The method <code>predict</code> is an alias for <code>sample(target="prediction")</code>.
 Usually, an <code>init</code> object or file should be given containing posterior
 samples.
For the help page of the base R <code>optimise</code> function, see
 <code><a href="/link/optimise?package=rbi&version=1.0.0" data-mini-rdoc="rbi::optimise">optimise</a></code>.

Provides a complete interface to 'LibBi', a library for Bayesian
inference (see <https://libbi.org> and Murray, 2015
<doi:10.18637/jss.v067.i10> for more information). This includes functions
for manipulating 'LibBi' models, for reading and writing 'LibBi'
input/output files, for converting 'LibBi' output to provide traces for use
with the coda package, and for running 'LibBi' to conduct inference.

Sebastian Funk

Interface to 'LibBi'

Pierre E. Jacob

Anthony Lee

Lawrence M. Murray

Sam Abbott

predict function

<dl><dt>x</dt>
<dd>a <code>libbi</code> object</dd>
<dt>...</dt>
<dd>any arguments to be passed to <code><a href="/link/sample?package=rbi&version=1.0.0" data-mini-rdoc="rbi::sample">sample</a></code></dd></dl>

Arguments

The method <code>predict</code> is an alias for <code>sample(target="prediction")</code>.
 Usually, an <code>init</code> object or file should be given containing posterior
 samples.
For the help page of the base R <code>optimise</code> function, see
 <code><a href='https://rdrr.io/r/stats/optimize.html'>optimise</a></code>.

Using the LibBi wrapper to predict — predict

<dl>

<dt>x</dt>
<dd>a <code>libbi</code> object</dd>


<dt>...</dt>
<dd>any arguments to be passed to <code><a href='https://rdrr.io/r/base/sample.html'>sample</a></code></dd>

</dl>

predict: Using the LibBi wrapper to predict

Description

Usage

Value

Arguments