glimpse.rbiom

A toolkit for working with Biological Observation Matrix ('BIOM') files.
Read/write all 'BIOM' formats. Compute rarefaction, alpha diversity, and
beta diversity (including 'UniFrac'). Summarize counts by taxonomic level.
Subset based on metadata. Generate visualizations and statistical analyses.
CPU intensive operations are coded in C for speed.

Daniel P. Smith

rbiom

Read/Write, Analyze, and Visualize 'BIOM' Data

Alkek Center for Metagenomics and Microbiome Research 

glimpse.rbiom function

<dl><dt>x</dt>
<dd>An rbiom object, such as from <code>as_rbiom()</code>.</dd>
<dt>width</dt>
<dd>Width of output. See <code><a href="https://pillar.r-lib.org/reference/glimpse.html">pillar::glimpse()</a></code> documentation.
Default: <code>NULL</code></dd>
<dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Get a glimpse of your metadata. — glimpse.rbiom

<dl>

<dt>x</dt>
<dd>An rbiom object, such as from <code>as_rbiom()</code>.</dd>


<dt>width</dt>
<dd>Width of output. See <code><a href='https://pillar.r-lib.org/reference/glimpse.html'>pillar::glimpse()</a></code> documentation.
Default: <code>NULL</code></dd>


<dt>...</dt>
<dd>Not used.</dd>

</dl>

glimpse.rbiom: Get a glimpse of your metadata.

Description

Usage

Value

Arguments

See Also

Examples