rdiversity (version 2.2.0)

raw_beta: Raw beta (low level diversity component)

Description

Calculates the low-level diversity component necessary for calculating raw beta diversity.

Usage

raw_beta(meta)

Arguments

meta

object of class metacommunity

Value

raw_beta returns an object of class relativeentropy

Details

Values generated from raw_beta() may be input into subdiv() and metadiv() to calculate raw subcommunity and metacommunity beta diversity.

References

R. Reeve, T. Leinster, C. Cobbold, J. Thompson, N. Brummitt, S. Mitchell, and L. Matthews. 2016. How to partition diversity. arXiv 1404.6520v3:1<U+2013>9.

Examples

# NOT RUN {
pop <- data.frame(a = c(1,3), b = c(1,1))
row.names(pop) <- paste0("sp", 1:2)
pop <- pop/sum(pop)
meta <- metacommunity(pop)

# Calculate raw beta component
b <- raw_beta(meta)
subdiv(b, 1)
metadiv(b, 1)

# }