master_txt

Run the programs specified by the pattern, in the order as the
pattern select the files. Keep a log of the results. By default
the pattern starting with two numbers and ending with .R is selected.
They are run in order

Set of utilities to facilitate the reproduction of analysis in R.
It allow to make_structure(), clean_structure(), and run and log programs in a
predefined order to allow secondary files, analysis and reports be constructed in
an ordered and reproducible form.

Aponte John

repana

Repeatable Analysis in R

John J. Aponte

master_txt function

<dl><dt>pattern</dt>
<dd>Regular expression to select the files to run</dd>
<dt>start</dt>
<dd>index of the program to start</dd>
<dt>stop</dt>
<dd>index of the program to stop</dd>
<dt>logdir</dt>
<dd>directory to keep the logs of the files. By default</dd>
<dt>rscript_path</dt>
<dd>path to the <code>Rscript</code> file
the entry on the <code>config.yml</code> <code>dirs:logs</code></dd></dl>

Arguments

Runs the programs — master_txt

<dl>

<dt>pattern</dt>
<dd>Regular expression to select the files to run</dd>


<dt>start</dt>
<dd>index of the program to start</dd>


<dt>stop</dt>
<dd>index of the program to stop</dd>


<dt>logdir</dt>
<dd>directory to keep the logs of the files. By default</dd>


<dt>rscript_path</dt>
<dd>path to the <code>Rscript</code> file
the entry on the <code>config.yml</code> <code>dirs:logs</code></dd>

</dl>

master_txt: Runs the programs

Description

Usage

Value

Arguments

Details