checkoutVersion

A collection of high-level, machine- and OS-independent tools
for making deeply reproducible and reusable content in R.
The two workhorse functions are 'Cache()' and 'prepInputs()'. `Cache()`
allows for nested caching, is robust to environments and objects with
environments (like functions), and has deals with some classes of
file-backed R objects e.g., from `terra` and `raster` packages.
Both functions have been developed to
be foundational components of data retrieval
and processing in continuous workflow situations. In both functions,
efforts are made to make the first and subsequent calls of functions have
the same result, but faster at subsequent times by way of checksums
and digesting. Several features are still under development, including
cloud storage of cached objects, allowing for sharing between users. Several
advanced options are available, see '?reproducibleOptions()'.

Eliot J B

reproducible

A Set of Tools that Enhance Reproducibility of R Code

Eliot J B McIntire

Alex M Chubaty

Tati Micheletti

Ceres Barros

Ian Eddy

His Majesty the King in Right of Canada, as represented by the Minister of Natural Resources Canada 

checkoutVersion function

<dl><dt>repo</dt>
<dd>Repository address in the format <code>username/repo[/subdir][@ref|#pull]</code>.
Alternatively, you can specify subdir and/or ref using the respective parameters (see below);
if both is specified, the values in repo take precedence.</dd>
<dt>localRepoPath</dt>
<dd>Character string. The path into which the git repo should be
cloned, fetched, and checked out from.</dd>
<dt>cred</dt>
<dd>Character string. Either the name of the environment variable
that contains the GitHub PAT or filename of the GitHub private key file.</dd>
<dt>...</dt>
<dd>Additional arguments passed to <code>git2r</code> functions.</dd></dl>

Arguments

Author

Clone, fetch, and checkout from GitHub.com repositories — checkoutVersion

<dl>

<dt>repo</dt>
<dd>Repository address in the format <code>username/repo[/subdir][@ref|#pull]</code>.
Alternatively, you can specify subdir and/or ref using the respective parameters (see below);
if both is specified, the values in repo take precedence.</dd>


<dt>localRepoPath</dt>
<dd>Character string. The path into which the git repo should be
cloned, fetched, and checked out from.</dd>


<dt>cred</dt>
<dd>Character string. Either the name of the environment variable
that contains the GitHub PAT or filename of the GitHub private key file.</dd>


<dt>...</dt>
<dd>Additional arguments passed to <code>git2r</code> functions.</dd>

</dl>

Clone, fetch, and checkout from GitHub.com repositories

checkoutVersion: Clone, fetch, and checkout from GitHub.com repositories

Description

Usage

Value

Arguments

Author