retistruct.batch.figures

Recurse through a directory tree, determining whether the
directory contains valid derived data and plotting graphs if it
does.

Reconstructs retinae by morphing a flat surface with cuts
(a dissected flat-mount retina) onto a curvilinear surface (the
standard retinal shape). It can estimate the position of a point
on the intact adult retina to within 8 degrees of arc (3.6% of
nasotemporal axis). The coordinates in reconstructed retinae can
be transformed to visuotopic coordinates. For more details see
Sterratt, D. C., Lyngholm, D., Willshaw, D. J. and Thompson, I. D.
(2013) <doi:10.1371/journal.pcbi.1002921>.

David Sterratt

retistruct

Retinal Reconstruction Program

Daniel Lyngholm

Jan Okul

retistruct.batch.figures function

<dl><dt>tldir</dt>
<dd>The top level directory of the tree through which to
recurse.</dd>
<dt>outputdir</dt>
<dd>Directory in which to dump a log file and images</dd>
<dt>...</dt>
<dd>Parameters passed to plotting functions</dd></dl>

Arguments

Author

Plot figures for a batch of reconstructions — retistruct.batch.figures

<dl>

<dt>tldir</dt>
<dd>The top level directory of the tree through which to
recurse.</dd>


<dt>outputdir</dt>
<dd>Directory in which to dump a log file and images</dd>


<dt>...</dt>
<dd>Parameters passed to plotting functions</dd>

</dl>

retistruct.batch.figures: Plot figures for a batch of reconstructions

Description

Usage

Arguments

Author