retistruct.cli.process

This function processes a <code>dataset</code>, saving the
reconstruction data and MATLAB export data to the <code>dataset</code>
directory and printing figures to <code>outputdir</code>.

Reconstructs retinae by morphing a flat surface with cuts
(a dissected flat-mount retina) onto a curvilinear surface (the
standard retinal shape). It can estimate the position of a point
on the intact adult retina to within 8 degrees of arc (3.6% of
nasotemporal axis). The coordinates in reconstructed retinae can
be transformed to visuotopic coordinates. For more details see
Sterratt, D. C., Lyngholm, D., Willshaw, D. J. and Thompson, I. D.
(2013) <doi:10.1371/journal.pcbi.1002921>.

David Sterratt

retistruct

Retinal Reconstruction Program

Daniel Lyngholm

Jan Okul

retistruct.cli.process function

<dl><dt>dataset</dt>
<dd>Path to dataset to process</dd>
<dt>outputdir</dt>
<dd>Directory in which to save any figures</dd>
<dt>device</dt>
<dd>String representing device to print figures to</dd>
<dt>titrate</dt>
<dd>Whether to titrate or not</dd>
<dt>matlab</dt>
<dd>Whether to save to MATLAB or not</dd></dl>

Arguments

Author

Process a dataset, saving results to disk — retistruct.cli.process

<dl>

<dt>dataset</dt>
<dd>Path to dataset to process</dd>


<dt>outputdir</dt>
<dd>Directory in which to save any figures</dd>


<dt>device</dt>
<dd>String representing device to print figures to</dd>


<dt>titrate</dt>
<dd>Whether to titrate or not</dd>


<dt>matlab</dt>
<dd>Whether to save to MATLAB or not</dd>

</dl>

retistruct.cli.process: Process a dataset, saving results to disk

Description

Usage

Arguments

Author