plotTrace

Plot trace of cumulative OOB (classification) or MSE 
 (regression) error rate by number of trees.

Estimate significance of importance metrics
for a Random Forest model by permuting the response
variable. Produces null distribution of importance
metrics for each predictor variable and p-value of
observed. Provides summary and visualization functions for 'randomForest'
results.

Eric Archer

rfPermute

Estimate Permutation p-Values for Random Forest Importance
Metrics

plotTrace function

<dl><dt>x</dt>
<dd>a <code>rfPermute</code> or <code>randomForest</code> model object.</dd>
<dt>pct.correct</dt>
<dd>display y-axis as percent correctly classified 
(<code>TRUE</code>) or OOB error rate (<code>FALSE</code>).</dd>
<dt>plot</dt>
<dd>display the plot?</dd></dl>

Arguments

Eric Archer <a href="/link/eric.archer%40noaa.gov?package=rfPermute&version=2.5.2" data-mini-rdoc="rfPermute::eric.archer@noaa.gov">eric.archer@noaa.gov</a>

Author

Plot Trace — plotTrace

<dl>

<dt>x</dt>
<dd>a <code>rfPermute</code> or <code>randomForest</code> model object.</dd>


<dt>pct.correct</dt>
<dd>display y-axis as percent correctly classified 
(<code>TRUE</code>) or OOB error rate (<code>FALSE</code>).</dd>


<dt>plot</dt>
<dd>display the plot?</dd>

</dl>

Eric Archer <a href='mailto:eric.archer@noaa.gov'>eric.archer@noaa.gov</a>

plotTrace: Plot Trace

Description

Usage

Value

Arguments

Author

Examples