rgbif (version 0.4.0)

density_spplist: The density web service provides access to records showing the density of occurrence records from the GBIF Network by one-degree cell.

Description

This function is deprecated.

Usage

density_spplist(taxonconceptKey = NULL,
    dataproviderkey = NULL, dataresourcekey = NULL,
    resourcenetworkkey = NULL, originisocountrycode = NULL,
    format = NULL,
    spplist = c("none", "random", "greatest", "all"),
    listcount = "list")

Arguments

taxonconceptKey

Unique key for taxon (numeric). Count only records which are for the taxon identified by the supplied numeric key, including any records provided under synonyms of the taxon concerned, and any records for child taxa (e.g. all genera and species wi

dataproviderkey

Filter records to those provided by the supplied numeric key for a data provider. See provider(). (character)

dataresourcekey

Filter records to those provided by the supplied numeric key for a data resource See resource(). (character)

resourcenetworkkey

count only records which have been made available by resources identified as belonging to the network identified by the supplied numeric key.

originisocountrycode

Return density records for occurrences which occurred within the country identified by the supplied 2-letter ISO code.

format

Specifies the format in which the records are to be returned, one of: brief or kml (character)

spplist

Get the species list for a 1 degree cell. One of "none", "random", "greatest", or "all". "none" returns the data.frame of count of specimens by 1 degree cells without species list. "random" returns a species list selected randomly from one of the

listcount

Return a species list ('splist') or a data.frame of the species and the count for each species ('counts').

Value

• A vector of scientific species names for one degree grid cells.

Details

This is similar to the densitylist function. You can get the same data.frame of results as densitylist with this function, but you can also get a species list or data.frame of species and their counts for any degree cell.

Examples

# Just return the data.frame of counts by cells.
density_spplist(originisocountrycode = "CO")

# Get a species list by cell, choosing one at random
density_spplist(originisocountrycode = "CO", spplist = "random")
density_spplist(originisocountrycode = "CO", spplist = "r") # can abbr. spplist

# Get a species list by cell, choosing the one with the greatest no. of records
density_spplist(originisocountrycode = "CO", spplist = "great")

# Instead of a list, get back a data.frame with species names and counts
density_spplist(originisocountrycode = "CO", spplist = "great", listcount='counts')