ribd

ribd-package

<img src="figures/logo.png?package=ribd&version=1.7.1" style="float: right" alt="logo" width="120">
Recursive algorithms for computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal and X-linked coefficients are computed. Founders are allowed to be inbred, which enables construction of any given kappa coefficients, as described in Vigeland (2020) tools:::Rd_expr_doi("10.1007/s00285-020-01505-x"). In addition to the standard coefficients, 'ribd' also computes a range of lesser-known coefficients, including generalised kinship coefficients, multi-person coefficients and two-locus coefficients (Vigeland, 2023, tools:::Rd_expr_doi("10.1093/g3journal/jkac326")). Many features of 'ribd' are available through the online app 'QuickPed' at <a href="https://magnusdv.shinyapps.io/quickped">https://magnusdv.shinyapps.io/quickped</a>; see Vigeland (2022) tools:::Rd_expr_doi("10.1186/s12859-022-04759-y").

internal

Recursive algorithms for computing various relatedness
coefficients, including pairwise kinship, kappa and identity
coefficients. Both autosomal and X-linked coefficients are computed.
Founders are allowed to be inbred, which enables construction of any
given kappa coefficients, as described in Vigeland (2020)
<doi:10.1007/s00285-020-01505-x>. In addition to the standard
coefficients, 'ribd' also computes a range of lesser-known
coefficients, including generalised kinship coefficients, multi-person
coefficients and two-locus coefficients (Vigeland, 2023,
<doi:10.1093/g3journal/jkac326>). Many features of 'ribd' are
available through the online app 'QuickPed' at
<https://magnusdv.shinyapps.io/quickped>; see Vigeland (2022)
<doi:10.1186/s12859-022-04759-y>.

Magnus Vigeland

Pedigree-based Relatedness Coefficients

Magnus Dehli Vigeland

ribd-package function

Maintainer: Magnus Dehli Vigeland <a href="/link/m.d.vigeland%40medisin.uio.no?package=ribd&version=1.7.1" data-mini-rdoc="ribd::m.d.vigeland@medisin.uio.no">m.d.vigeland@medisin.uio.no</a> (<a href="https://orcid.org/0000-0002-9134-4962">ORCID</a>)

Author

<img src='figures/logo.png' style='float: right' alt='logo' width='120' />
Recursive algorithms for computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal and X-linked coefficients are computed. Founders are allowed to be inbred, which enables construction of any given kappa coefficients, as described in Vigeland (2020) tools:::Rd_expr_doi("10.1007/s00285-020-01505-x"). In addition to the standard coefficients, 'ribd' also computes a range of lesser-known coefficients, including generalised kinship coefficients, multi-person coefficients and two-locus coefficients (Vigeland, 2023, tools:::Rd_expr_doi("10.1093/g3journal/jkac326")). Many features of 'ribd' are available through the online app 'QuickPed' at <a href='https://magnusdv.shinyapps.io/quickped'>https://magnusdv.shinyapps.io/quickped</a>; see Vigeland (2022) tools:::Rd_expr_doi("10.1186/s12859-022-04759-y").

ribd: Pedigree-based Relatedness Coefficients — ribd-package

Maintainer: Magnus Dehli Vigeland <a href='mailto:m.d.vigeland@medisin.uio.no'>m.d.vigeland@medisin.uio.no</a> (<a href='https://orcid.org/0000-0002-9134-4962'>ORCID</a>)

ribd-package: ribd: Pedigree-based Relatedness Coefficients

Description

Arguments

Author

See Also