ligerRNADataset-class

ligerRNADataset

<p>Inherits from ligerDataset class. Contained slots
can be referred with the link. This subclass does not have any different from
the default <code>ligerDataset</code> class except the class name.</p>

Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. See Welch J, Kozareva V, et al (2019) <doi:10.1016/j.cell.2019.05.006>, and Liu J, Gao C, Sodicoff J, et al (2020) <doi:10.1038/s41596-020-0391-8> for more details.

Yichen Wang

rliger

Linked Inference of Genomic Experimental Relationships

Joshua Welch

Chao Gao

Jialin Liu

Joshua Sodicoff

Velina Kozareva

Evan Macosko

Paul Hoffman

Ilya Korsunsky

Robert Lee

Andrew Robbins

ligerRNADataset-class function

Subclass of ligerDataset for RNA modality — ligerRNADataset-class

Subclass of ligerDataset for RNA modality

ligerRNADataset-class: Subclass of ligerDataset for RNA modality

Description

Arguments