pros

Definition of processes of the bacteria growth example model.

Provides an R6 class and several utility methods to
facilitate the implementation of models based on ordinary
differential equations. The heart of the package is a code generator
that creates compiled 'Fortran' (or 'R') code which can be passed to
a numerical solver. There is direct support for solvers contained
in packages 'deSolve' and 'rootSolve'.

David Kneis

rodeo

A Code Generator for ODE-Based Models

pros function

A data frame with the following fields:<dl>
 <dt>name : </dt>
<dd>Name of the process</dd> <dt>unit : </dt>
<dd>Unit of the rate expression</dd> <dt>description : </dt>
<dd>Short description (text)</dd> <dt>expression : </dt>
<dd>Mathematical expression (as a string)</dd> 
</dl>

Format

Declaration of Processes — pros

A data frame with the following fields:<dl>
 <dt>name : </dt>
<dd>Name of the process</dd>

 <dt>unit : </dt>
<dd>Unit of the rate expression</dd>

 <dt>description : </dt>
<dd>Short description (text)</dd>

 <dt>expression : </dt>
<dd>Mathematical expression (as a string)</dd>

 
</dl>

pros: Declaration of Processes

Description

Arguments

Format