hist.feat

an object of type <code>feat</code>

a character string, denoting the value to make the histogram with.
Currently the only valid types are "length" or "score"

type

additional arguments to be passed to <code>hist</code>

features

Provides an R interface to the 'PHAST'(<http://compgen.cshl.edu/phast/>) software
(Phylogenetic Analysis with Space/Time Models). It can be used for
many types of analysis in comparative and evolutionary genomics,
such as estimating models of evolution from sequence data, scoring
alignments for conservation or acceleration, and predicting
elements based on conservation or custom phylogenetic hidden Markov
models. It can also perform many basic operations on multiple
sequence alignments and phylogenetic trees.

hist.feat: plot histogram of feature lengths

Description

Usage

Arguments