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rtracklayer (version 1.32.1)

RTLFile-class: RTLFile objects

Description

A RTLFile object is the base class for classes representing files accessible with rtracklayer. It wraps a resource (either a path, URL or connection).

Arguments

Accessor Methods

In the code snippets below, x represents a RTLFile object.
path(x): Gets the path, as a character vector, to the resource represented by the RTLFile object, if possible.
resource(x): Gets the low-level resource, either a character vector (a path or URL) or a connection.

Related functions

FileForFormat(path, format = file_ext(path)): Determines the file type of path and returns a high-level file object such as BamFile, BEDFile, BigWigFile etc..

See Also

Implementing classes include: BigWigFile, TwoBitFile, BEDFile, GFFFile, and WIGFile.