local.t.Welch

local.t.Student

local.t.paired

local.t.LM

local.f.ANOVA

global.Wilcoxon

global.Kolmogorov

global.AveDiff

global.Fisher

global.Pearson

error.FDR.YB

error.FDR.BH

error.FWER.WY

error.FWER.Bonf

error.FWER.Holm

getPImatrix

getPIcomplete

getCOXresiduals

getXYresiduals

sigfig


  The following functions return the appropriate functions within a SAFE analysis and are intended for internal use only.


internal

safe-internal

SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.

William T Barry

safe

Significance Analysis of Function and Expression

safe-internal function

The following functions return the appropriate functions within a SAFE analysis and are intended for internal use only.

Internal SAFE functions

safe-internal: Internal SAFE functions

Description

Arguments

Details