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sangerseqR (version 1.8.2)

Tools for Sanger Sequencing Data in R

Description

This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms.

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Version

Version

1.8.2

License

GPL-2

Maintainer

Jonathon Hill

Last Published

February 15th, 2017

Functions in sangerseqR (1.8.2)

setAllelePhase

Set Reference and Alternate Alleles
chromatogram

Generate Chromatogram
abif-class

ABIF Class Objects
PolyPeakParser

Run Poly Peak Parser
readsangerseq

Read Scf or ABIF Files
primarySeqID

Sangerseq Accessor Functions
read.scf

Read Scf Files
makeBaseCalls

Make Basecalls
sangerseq-class

Sangerseq Class Objects
sangerseqR-package

Tools for Sanger Sequencing Data in R
read.abif

Read ABIF Files
scf-class

Scf Class Objects