Cells_per_Sample

Get data.frame containing the number of cells per sample.

Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.

Samuel Marsh

scCustomize

Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing

Ming Tang

Velina Kozareva

Lucas Graybuck

Cells_per_Sample function

<dl><dt>seurat_object</dt>
<dd>Seurat object</dd>
<dt>sample_col</dt>
<dd>column name in meta.data that contains sample ID information. Default is NULL and
will use "orig.ident column</dd></dl>

Arguments

Cells per Sample — Cells_per_Sample

<dl>

<dt>seurat_object</dt>
<dd>Seurat object</dd>


<dt>sample_col</dt>
<dd>column name in meta.data that contains sample ID information. Default is NULL and
will use "orig.ident column</dd>

</dl>

Cells_per_Sample: Cells per Sample

Description

Usage

Value

Arguments

Examples