PalettePlot

Plots given color vector/palette in viewer to evaluate palette before plotting on data.

Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.

Samuel Marsh

scCustomize

Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing

Ming Tang

Velina Kozareva

Lucas Graybuck

PalettePlot function

<dl><dt>pal</dt>
<dd>a vector of colors (either named colors of hex codes).</dd>
<dt>label_color_num</dt>
<dd>logical, whether or not to numerically label the colors in output plot.
Default is TRUE is number of colors in <code>pal</code> is less than 75 and FALSE is greater than 75.</dd></dl>

Arguments

Plot color palette in viewer — PalettePlot

<dl>

<dt>pal</dt>
<dd>a vector of colors (either named colors of hex codes).</dd>


<dt>label_color_num</dt>
<dd>logical, whether or not to numerically label the colors in output plot.
Default is TRUE is number of colors in <code>pal</code> is less than 75 and FALSE is greater than 75.</dd>

</dl>

PalettePlot: Plot color palette in viewer

Description

Usage

Value

Arguments

References

Examples