Replace_Suffix

Replace barcode suffixes in matrix, data.frame, or list of matrices/data.frames

Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.

Samuel Marsh

scCustomize

Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing

Ming Tang

Velina Kozareva

Lucas Graybuck

Replace_Suffix function

<dl><dt>data</dt>
<dd>Either matrix/data.frame or list of matrices/data.frames with the cell barcodes in the column names.</dd>
<dt>current_suffix</dt>
<dd>a single value or vector of values representing current barcode suffix.
If suffix is the same for all matrices/data.frames in list only single value is required.</dd>
<dt>new_suffix</dt>
<dd>a single value or vector of values representing new barcode suffix to be added.
If desired suffix is the same for all matrices/data.frames in list only single value is required.
If no suffix is desired set <code>new_suffix = ""</code>.`</dd></dl>

Arguments

Replace barcode suffixes — Replace_Suffix

<dl>

<dt>data</dt>
<dd>Either matrix/data.frame or list of matrices/data.frames with the cell barcodes in the column names.</dd>


<dt>current_suffix</dt>
<dd>a single value or vector of values representing current barcode suffix.
If suffix is the same for all matrices/data.frames in list only single value is required.</dd>


<dt>new_suffix</dt>
<dd>a single value or vector of values representing new barcode suffix to be added.
If desired suffix is the same for all matrices/data.frames in list only single value is required.
If no suffix is desired set <code>new_suffix = ""</code>.`</dd>

</dl>

Replace_Suffix: Replace barcode suffixes

Description

Usage

Value

Arguments

Examples