scater (version 1.0.4)

mutate: Add new variables to pData(object).

Description

Adds new columns to pData(object) preserving existing variables.

Usage

mutate(object, ...)
"mutate"(object, ...)
mutate.SCESet(object, ...)

Arguments

object

A SCESet object.

...

Additional arguments to be passed to dplyr::mutate to act on pData(object).

Examples

data("sc_example_counts")
data("sc_example_cell_info")
pd <- new("AnnotatedDataFrame", data = sc_example_cell_info)
example_sceset <- newSCESet(countData = sc_example_counts, phenoData = pd)
example_sceset <- mutate(example_sceset, is_quiescent = Cell_Cycle == "G0")