scfetch (version 0.5.0)

ExtractGEOMeta: Extract Sample Metadata from GEO.

Description

Extract Sample Metadata from GEO.

Usage

ExtractGEOMeta(acce, platform = NULL, ...)

Value

Dataframe contains all metadata of provided GEO accession number.

Arguments

acce

GEO accession number.

platform

Platform information/field. Default: NULL (all platforms).

...

Parameters for getGEO.

Examples

# \donttest{
# users may need to set the size of the connection buffer
# Sys.setenv("VROOM_CONNECTION_SIZE" = 131072 * 60)
# extract metadata of specified platform
GSE200257.meta <- ExtractGEOMeta(acce = "GSE200257", platform = "GPL24676")
# }