scfetch (version 0.5.0)

ShowCBDatasets: Show All Available Datasets in UCSC Cell Browser.

Description

Show All Available Datasets in UCSC Cell Browser.

Usage

ShowCBDatasets(lazy = TRUE, json.folder = NULL, update = FALSE, quiet = FALSE)

Value

Dataframe contains all available datasets.

Arguments

lazy

Logical value, whether to always load datasets online or locally. Default: TRUE (load locally).

json.folder

Folder used to save or load datasets json files. Default: NULL (current working directory).

update

Logical value, whther to update local datasets json. Default: FALSE. For the first time, you should set lazy TRUE and update TRUE to save json files.

quiet

Logical value, whether to show downloading progress. Default: FALSE (show).

Examples

if (FALSE) {
# first time run (lazy mode), need users to provide json folder
ucsc.cb.samples <- ShowCBDatasets(lazy = TRUE, update = TRUE)
# second time run (lazy mode), need users to provide json folder
ucsc.cb.samples <- ShowCBDatasets(lazy = TRUE, update = FALSE)
}