sdm (version 1.2-55)

read.sdm: read/write sdm* object from/to a file

Description

Read an sdm object from a file, or write it to a file.

Usage

read.sdm(filename,...)
write.sdm(x,filename,overwrite,...)

Arguments

filename

Filename (character)

x

a sdm object (e.g., sdmModels,sdmdata or sdmSetting)

overwrite

Logical. If TRUE, "filename" will be overwritten if it exists (default is FALSE)

...

additional arguments

Author

Babak Naimi

https://www.r-gis.net/

https://www.biogeoinformatics.org/

Details

read.sdm function reads any files that has been writed by write.sdm. These functions use saveRDS and readRDS to write and read the sdm objects. Additional arguments ... pass to these functions. An sdmModels object is saved to a file with an extension of ".sdm". The file extensions for sdmdata and sdmSetting object are ".sdd", and "sds", respectively.

References

Naimi, B., Araujo, M.B. (2016) sdm: a reproducible and extensible R platform for species distribution modelling, Ecography, 39:368-375, DOI: 10.1111/ecog.01881

Examples

if (FALSE) {

file <- system.file("external/data.sdd", package="sdm")

d <- read.sdm(file)

d
# can be used to read sdm models (sdmModels) and sdmSettings as well.

write.sdm(d,'dataset') 
# extension is created for data, model and settings as .sdd, .sds, and .sdm respectively.

list.files(pattern='dataset')
}