collate: Array of Parameter Estimates

Description

Estimates from one or more openCR models are formed into an array.

Usage

# S3 method for secr
collate(object, ..., realnames = NULL, betanames = NULL, newdata = NULL, 
    alpha = 0.05, perm = 1:4, fields = 1:4)
# S3 method for ipsecr
collate(object, ..., realnames = NULL, betanames = NULL, newdata = NULL, 
    alpha = 0.05, perm = 1:4, fields = 1:4)
# S3 method for secrlist
collate(object, ..., realnames = NULL, betanames = NULL, newdata = NULL, 
    alpha = 0.05, perm = 1:4, fields = 1:4)

Value

A 4-dimensional array of model-specific parameter estimates. By default, the dimensions correspond respectively to

rows in newdata (usually sessions),
models,
statistic fields (estimate, SE.estimate, lcl, ucl), and
parameters ("phi", "sigma" etc.).

It often helps to reorder the dimensions with the perm argument.

Arguments

object: secr or secrlist object
...: other secr objects
realnames: character vector of real parameter names
betanames: character vector of beta parameter names
newdata: optional dataframe of values at which to evaluate models
alpha: alpha level for confidence intervals
perm: permutation of dimensions in output from collate
fields: vector to restrict summary fields in output

Details

collate extracts parameter estimates from a set of fitted secr model objects.

fields may be used to select a subset of summary fields ("estimate","SE.estimate","lcl","ucl") by name or number.

Examples

Run this code


collate (secrdemo.0, secrdemo.b, perm = c(4,2,3,1))[,,1,]