Generic function for plotting results from any sensitivity analysis performed with 'sensiPhy'
sensi_plot(x, ...)any output from the sensiPhy package.
further arguments to methods
sensi_plot recognize and print different sets of graphs depending on the function that generated 'x'. See the links below for details about the graphs generated for each sensiPhy function:
clade_phylm: sensi_plot.sensiClade
influ_phylm: sensi_plot.sensiInflu
samp_phylm: sensi_plot.sensiSamp
intra_phylm: sensi_plot.sensiIntra
tree_phylm: sensi_plot.sensiTree
PGLS regressions (interacting uncertainties):
tree_intra_phylm: sensi_plot.sensiTree_Intra
intra_clade_phylm: sensi_plot.sensiIntra_Clade
intra_influ_phylm: sensi_plot.sensiIntra_Influ
intra_samp_phylm: sensi_plot.sensiIntra_Samp
tree_clade_phylm: sensi_plot.sensiTree_Clade
tree_influ_phylm: sensi_plot.sensiTree_Influ
tree_samp_phylm: sensi_plot.sensiTree_Samp
Phylogenetic signal:
clade_physig: sensi_plot.clade.physig
influ_physig: sensi_plot.influ.physig
samp_physig: sensi_plot.samp.physig
tree_physig: sensi_plot.tree.physig
intra_physig: sensi_plot.intra.physig
trait evolution (continuous & discrete characters):
clade_continuous & _discrete sensi_plot.sensiClade.TraitEvol
influ_continuous & _discrete sensi_plot.sensiInflu.TraitEvol
tree_continuous & _discrete sensi_plot.sensiTree.TraitEvol
samp_continuous & _discrete sensi_plot.sensiSamp.TraitEvol
The function `multiplot`, developed by Winston Chang, is used inside sensi_plot to print multiple graphs in one frame. The source code is available here: http://www.cookbook-r.com/Graphs/Multiple_graphs_on_one_page_(ggplot2)/