CombineCaseControlC

A vector of numeric read positions from case sample

cases

A vector of numeric read positions from control sample

controls

Combine the case and control reads; finds the unique read positions and count the number of case and control reads.

This is a method for DNA Copy Number Profiling using
Next-Generation Sequencing. It has new model and test
statistics based on non-homogeneous Poisson Processes with
change point models. It uses an adaptation of Circular Binary
Segmentation. Also included are methods for point-wise Bayesian
Confidence Interval and model selection method for the
change-point model. A case and a control sample reads (normal
and tumor) are required.

CombineCaseControlC: Combine case and control reads

Description

Usage

Arguments

Value

Details

See Also