JSSim_TumorSim2

<p>This data set contains a second set of simulated reads of a truncated chromosome from a Tumor sample, with spiked in signals</p>

datasets

This is a method for DNA Copy Number Profiling using
Next-Generation Sequencing. It has new model and test
statistics based on non-homogeneous Poisson Processes with
change point models. It uses an adaptation of Circular Binary
Segmentation. Also included are methods for point-wise Bayesian
Confidence Interval and model selection method for the
change-point model. A case and a control sample reads (normal
and tumor) are required.

Jeremy J Shen

seqCBS

Copy Number Profiling using Sequencing and CBS

JSSim_TumorSim2 function

<p>A matrix with 3 columns and 16225 rows</p>

JSSim_TumorSim2: Simulated Tumor sample dataset 2

Description

Usage

Arguments

Format