gcContentMatrix:
gcContentMatrix: Returns matrix with read counts for GC content.
Description
Returns a matrix with read counts.
Usage
gcContentMatrix(object)
Arguments
object
Fastqq: Object from wich data is copied.
Value
.
Details
The matrix contains one column for each FASTQ file. Rows labeled
from 0 to 100 which represents percent (%) GC content. The matrix contains
numbers of reads with the respective proportion of GC (Row 2 contains
number of reads with 2% GC content).
References
Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM
The sanger FASTQ file format for sequences with quality scores and
the Solexa/Illumina FASTQ variants.
Nucleic Acids Research 2010 Vol.38 No.6 1767-1771