writeSimContFastq(k=6, nk=5, nSeq=10, pos=1, kIndex=1, nContam=nSeq, filename="simc.fq.gz")
numeric
. Length of k-mer. Default value is 6.numeric
. Number of k-mers in each FASTQ read. Default
value is 5.numeric
. Number of simulated reads in FASTQ-file.
Default value is 10.numeric
. Determines at which position in sequence the
k-mer is inserted. 1-based (1=first position).numeric
. k-mer index of inserted k-mer.
The k-mer index can be retreaved for a given k-mer with 'kMerIndex'.numeric
. Absolute number of contaminated reads.
The k-mer's are inserted at the firsts 'nContam' reads
of the sequence array.character
. Name of written (compressed) FASTQ file.## Not run: writeSimContFastq()
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