seqinr (version 4.2-36)

countfreelists: The number of free lists available and annotation lines in an ACNUC server

Description

Returns the number of free lists available list of names of annotation lines in the opened ACNUC database.

Usage

countfreelists(socket = autosocket())
cfl(socket = autosocket())

Value

a list with the following 2 components:

free

numeric. The number of free lists

annotlines

vector of strings. Names of annotation lines

Arguments

socket

an object of class sockconn connecting to a remote ACNUC database (default is a socket to the last opened database).

Author

J.R. Lobry

References

https://doua.prabi.fr/databases/acnuc.html

citation("seqinr")

See Also

choosebank, query

Examples

if (FALSE)  # Need internet connection
  choosebank("emblTP")
  (rescountfreelists <- countfreelists())
  stopifnot(all(rescountfreelists$annotlines ==
   c("ALL", "AC",  "PR",  "DT",  "KW",  "OS",  "OC",
   "OG",  "RN",  "RC",  "RP",  "RX", "RG",  "RA",  "RT",  "RL",  "DR",
   "CC",  "AH",  "AS",  "FH",  "FT",  "CO",  "SQ", "SEQ")))
  closebank()