ec999

This dataset contains 999 coding sequences from the Escherichia
coli chromosome

datasets

Exploratory data analysis and data visualization
for biological sequence (DNA and protein) data. Seqinr includes
utilities for sequence data management under the ACNUC system
described in Gouy, M. et al. (1984) Nucleic Acids Res.
12:121-127 <doi:10.1093/nar/12.1Part1.121>.

Simon Penel

seqinr

Biological Sequences Retrieval and Analysis

Delphine Charif

Olivier Clerc

Carolin Frank

Anamaria Necşulea

Leonor Palmeira

Guy Perrière

ec999 function

List of 999 vectors of characters, one for each coding
sequence.<dl>
 <dt>ECFOLE.FOLE </dt>
<dd>chr [1:672] "A" "T" "G" "C" ...</dd> <dt>ECMSBAG.MSBA </dt>
<dd>chr [1:1749] "A" "T" "G" "C" ...</dd> <dt>ECNARZYW-C.NARV</dt>
<dd>chr [1:681] "A" "T" "G" "A" ...</dd> <dt>... </dt>
<dd>... TRUNCATED ...</dd> <dt>XYLEECOM.MALK </dt>
<dd>chr [1:1116] "A" "T" "G" "G" ...</dd> <dt>XYLEECOM.LAMB </dt>
<dd>chr [1:1341] "A" "T" "G" "A" ...</dd> <dt>XYLEECOM.MALM </dt>
<dd>chr [1:921] "A" "T" "G" "A" ...</dd>
</dl>

Format

999 coding sequences from E. coli — ec999

List of 999 vectors of characters, one for each coding
sequence.<dl>
 <dt>ECFOLE.FOLE </dt>
<dd>chr [1:672] "A" "T" "G" "C" ...</dd>

 <dt>ECMSBAG.MSBA </dt>
<dd>chr [1:1749] "A" "T" "G" "C" ...</dd>

 <dt>ECNARZYW-C.NARV</dt>
<dd>chr [1:681] "A" "T" "G" "A" ...</dd>

 <dt>... </dt>
<dd>... TRUNCATED ...</dd>

 <dt>XYLEECOM.MALK </dt>
<dd>chr [1:1116] "A" "T" "G" "G" ...</dd>

 <dt>XYLEECOM.LAMB </dt>
<dd>chr [1:1341] "A" "T" "G" "A" ...</dd>

 <dt>XYLEECOM.MALM </dt>
<dd>chr [1:921] "A" "T" "G" "A" ...</dd>


</dl>

ec999: 999 coding sequences from E. coli

Description

Usage

Arguments

Format

References

Examples