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seqmagick (version 0.1.7)

bam2DNAStringSet: bam2DNAStringSet

Description

convert bam file to aligned fasta file

Usage

bam2DNAStringSet(bamfile, refseq)

Value

DNAStringSet object

Arguments

bamfile

bam file

refseq

refseq, DNAStringSet object

Author

Guangchuang Yu