seqmagick (version 0.1.7)

fa_combine: fa_combine

Description

combine 2 fasta files into 1

Usage

fa_combine(file1, file2, outfile = NULL, type = "interleaved")

Value

BStringSet

Arguments

file1

fasta file 1

file2

fasta file 2

outfile

output file

type

one of interleaved and sequential

Author

Guangchuang Yu

Examples

fa_file <- system.file("extdata/HA.fas", package="seqmagick")
x <- fa_read(fa_file)
fa1 <- tempfile(fileext=".fa")
fa2 <- tempfile(fileext=".fa")
fa_write(x[1:5], fa1)
fa_write(x[6:10], fa2)
fa_combine(fa1, fa2)