renameTXT

rename txt file (eg Description line of fasta file)
according to first token (eg accession number)

Supports reading and writing sequences for different formats (currently interleaved and sequential formats for 'FASTA' and 'PHYLIP'), file conversion, and manipulation (e.g. filter sequences that contain specify pattern, export consensus sequence from an alignment).

Guangchuang Yu

seqmagick

Sequence Manipulation Utilities

renameTXT function

<dl><dt>txt_file</dt>
<dd>txt file</dd>
<dt>name_file</dt>
<dd>name file</dd>
<dt>sep</dt>
<dd>separator</dd>
<dt>split</dt>
<dd>logical, split result or not</dd></dl>

Arguments

Author

renameTXT — renameTXT

<dl>

<dt>txt_file</dt>
<dd>txt file</dd>


<dt>name_file</dt>
<dd>name file</dd>


<dt>sep</dt>
<dd>separator</dd>


<dt>split</dt>
<dd>logical, split result or not</dd>

</dl>

renameTXT: renameTXT

Description

Usage

Value

Arguments

Author