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sequences (version 0.5.9)

Generic and Biological Sequences

Description

Educational package used in R courses to illustrate object-oriented programming and package development. Using biological sequences (DNA and RNA) as a working example.

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Install

install.packages('sequences')

Monthly Downloads

42

Version

0.5.9

License

GPL-3

Issues

2

Pull Requests

0

Stars

5

Forks

4

Maintainer

Laurent Gatto

Last Published

December 3rd, 2014

Functions in sequences (0.5.9)

GenericSeq-class

Class "GenericSeq"
readFasta

Read fasta files.
Seq-class

Class "Seq"
sequences-package

A short demo package featuring biological sequences.
DnaSeq-class

Class "DnaSeq" and "RnaSeq"
gccount2

Count bases in sequence (using Rcpp)
dnaseq

An DnaSeq example.
gccount

Count bases in sequence