Inherit_patterns

Inheritance patterns used by SimGeno for non-autosomal SNPs,
 identical to those in Inherit.xlsx

datasets

sequoia

inherit

Multi-generational pedigree inference from incomplete data on
hundreds of SNPs, including parentage assignment and sibship clustering.
See Huisman (2017) (<DOI:10.1111/1755-0998.12665>) for more information.

Jisca Huisman

Pedigree Inference from SNPs

Inherit_patterns function

An array with the following dimensions:<dl>
 <dt>d1</dt>
<dd>type: autosomal, x-chromosome, y-chromosome, or mtDNA</dd> <dt>d2</dt>
<dd>offspring sex: female, male, or unknown</dd> <dt>d3</dt>
<dd>offspring genotype: aa (0), aA (1), Aa (1), or AA (2)</dd> <dt>d4</dt>
<dd>mother genotype</dd> <dt>d5</dt>
<dd>father genotype</dd>
</dl>

Format

Jisca Huisman, <a href="/link/jisca.huisman%40gmail.com?package=sequoia&version=2.11.1" data-mini-rdoc="sequoia::jisca.huisman@gmail.com">jisca.huisman@gmail.com</a>

Author

Inheritance patterns — Inherit_patterns

An array with the following dimensions:<dl>
 <dt>d1</dt>
<dd>type: autosomal, x-chromosome, y-chromosome, or mtDNA</dd>

 <dt>d2</dt>
<dd>offspring sex: female, male, or unknown</dd>

 <dt>d3</dt>
<dd>offspring genotype: aa (0), aA (1), Aa (1), or AA (2)</dd>

 <dt>d4</dt>
<dd>mother genotype</dd>

 <dt>d5</dt>
<dd>father genotype</dd>


</dl>

Jisca Huisman, <a href='mailto:jisca.huisman@gmail.com'>jisca.huisman@gmail.com</a>

Inherit_patterns: Inheritance patterns

Description

Usage

Arguments

Format

Author

See Also