seriation (version 1.5.6)

Wood: Gene Expression Data for Wood Formation in Poplar Trees

Description

A data matrix containing a sample of the normalized gene expression data for 6 locations in the stem of Popla trees published in the study by Herzberg et al (2001). The sample of 136 genes selected by Caraux and Pinloche (2005).

Format

The format is a 136 x 6 matrix.

References

Hertzberg M., H. Aspeborg, J. Schrader, A. Andersson, R.Erlandsson, K. Blomqvist, R. Bhalerao, M. Uhlen, T. T. Teeri, J. Lundeberg, Bjoern Sundberg, P. Nilsson and Goeran Sandberg (2001): A transcriptional roadmap to wood formation, PNAS, 98(25), 14732--14737.

Caraux G. and Pinloche S. (2005): PermutMatrix: a graphical environment to arrange gene expression profiles in optimal linear order, Bioinformatics, 21(7) 1280--1281.

See Also

Other data: Chameleon, Irish, Munsingen, SupremeCourt, Townships, Zoo, create_lines_data(), is.robinson()

Examples

data(Wood)
head(Wood)