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sleepr (version 0.3.1)

Analyse Activity and Sleep Behaviour

Description

Use behavioural variables to score activity and infer sleep from bouts of immobility. It is primarily designed to score sleep in fruit flies from Drosophila Activity Monitor (TriKinetics) and Ethoscope data. It implements sleep scoring using the "five-minute rule" (Hendricks et al. (2000) ), activity classification for Ethoscopes (Geissmann et al. (2017) ) and a new algorithm to detect when animals are dead.

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Install

install.packages('sleepr')

Monthly Downloads

351

Version

0.3.1

License

GPL-3

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Maintainer

Quentin Geissmann

Last Published

March 27th, 2025

Functions in sleepr (0.3.1)

curate_dead_animals

Remove -- irrelevant -- data after individual have died
bout_analysis

Find "bouts" in categorical time series
sleep_annotation

Score sleep behaviour from immobility
motion_detectors

Motion detector for Ethocope data