Plot the mean-variance relationship of transcripts as modeled in sleuth. Each
dot represents a transcript. The blue dots represent the transcripts that
are used in the shrinkage estimation. The fitted curve represents the smooth fit.
plot_mean_var(obj, which_model = "full", point_alpha = 0.4,
point_size = 2, point_colors = c("black", "dodgerblue"),
smooth_alpha = 1, smooth_size = 0.75, smooth_color = "red")a sleuth object
which fit to use
the alpha (opacity) of the points (0, 1)
the size of the points
the alpha (opacity) of the line
the size of the line
the color of the smooth line
a ggplot object
The x-axis represents the mean expression of transcripts pooled across all samples. The y-axis represents the 'biological' variance after the technical variance has been removed.