sleuth (version 0.29.0)

read_kallisto: Read kallisto output

Description

This is a general driver function to read kallisto output. It can read either H5 or tsv.

Usage

read_kallisto(path, read_bootstrap = TRUE, max_bootstrap = NULL)

Arguments

read_bootstrap

if TRUE, bootstraps will be read (h5 only)

max_bootstrap

an integer denoting the number of bootstraps to read. if NULL read everything available (h5 only)

either

the kallisto directory name or the file name of a h5 or tsv output from kallisto

Value

a kallisto object