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sleuth (version 0.30.0)

get_bootstrap_summary: bootstrap summary

Description

Extract the bootstrap summary from a sleuth object that has been initialized in sleuth_prep.

Usage

get_bootstrap_summary(obj, target_id, units = "est_counts")

Arguments

obj

a sleuth object such that extra_bootstrap_summary = TRUE inside of sleuth_prep.

target_id

a character vector of length 1 indicating the target_id (transcript or gene name depending on aggregation mode)

units

a character vector of either 'est_counts' or 'tpm' (also requires extra_bootstrap_summary = TRUE in sleuth_prep)

Value

a data.frame with the summary statistics across all samples for that particular target