Plot technical variance versus observed variance
plot_vars(obj, test = NULL, test_type = "wt", which_model = "full",
sig_level = 0.1, point_alpha = 0.2, sig_color = "red", xy_line = TRUE,
xy_line_color = "red", highlight = NULL, highlight_color = "green")
a sleuth
object
the name of the test to highlight significant transcripts for
either 'wt' for wald test or 'lrt' for likelihood ratio test
a character string denoting which model to use for the test
the alpha for the points
if TRUE, plot the xy_line
a string denoting the color for the xy line
a data.frame
with one column, target_id
.
These points will be highlighted in the plot. if NULL
, no points will be highlighted.
the color to highlight points.
a ggplot2
object